Package index • rasSS

All functions

call_peaks(): Run RAS change-point detection and map peaks to base pairs
get_marginal_stats(): Marginal GWAS statistics for continuous trait
get_marginal_stats_bin(): Marginal GWAS statistics for binary trait
harmonize(): Harmonize sumstats against an LD reference (single study)
harmonize_two(): Harmonize two independent sumstats against an LD reference
ld_matrix(): Build LD matrix from a PLINK dosage export
make_pheno(): Simulate phenotype from causal effects
prune_ld(): Greedy LD pruning
quiet(): Suppress stdout, messages, and warnings
read_bim(): Read a PLINK .bim file into a standardized table
read_sumstats(): Read GWAS summary statistics into a standardized table
scan_block(): Run one genomic block end-to-end
scan_ss(): Summary-Statistic RAS Profile Generation.
sim_genotypes(): Simulate genotypes from an LD matrix
t_burden(): Summary-Statistic Weighted Burden Statistic
write_snp_list(): Write an rsID list for PLINK –extract